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Bioinformatics pronunciation guide

A pronunciation guide for bioinformatics terms.

TermPronunciation
adenine/ˈædəniːn/
adenosine/əˈdɛnəsiːn/
alanine/ˈæləniːn/
amino acid/əˈmiːnoʊ ˈæsɪd/
angstrom/ˈæŋstrəm/
asparagine/əˈspærədʒiːn/
aspartic acid/əˈspɑːrtɪk ˈæsɪd/
Bayes/ˈbeɪz/
Bayesian/ˈbeɪziən/
Bioconductor/ˈbaɪoʊkəndʌktər/
bioinformatics/ˌbaɪoʊˌɪnfərˈmætɪks/
BLAST/ˈblæst/
Boolean/ˈbuːliən/
Broad Institute/ˈbroʊd ˈɪnstɪtjuːt/
ClustalW/ˈklʌstəl ˈdʌbəljuː/
computational/ˌkɒmpjʊˈteɪʃənəl/
contig/ˈkɒntɪɡ/
cytidine/ˈsɪtɪdiːn/
cytosine/ˈsaɪtəsiːn/
Entrez/ˈɒntreɪ/
epigenome/ˌɛpɪˈdʒiːnoʊm/
epigenomic/ˌɛpɪdʒɪˈnoʊmɪk/
epigenomics/ˌɛpɪdʒɪˈnoʊmɪks/
exon/ˈɛksɒn/
FASTA/ˈfæstə/
FASTQ/ˈfæst ˈkjuː/
GenBank/ˈdʒɛnbæŋk/
genome/ˈdʒiːnoʊm/
genomic/dʒɪˈnoʊmɪk/
genomics/dʒɪˈnoʊmɪks/
glutamate/ˈɡluːtəmeɪt/
glutamic acid/ɡluːˈtæmɪk ˈæsɪd/
glutamine/ˈɡluːtəmiːn/
glycine/ˈɡlaɪsiːn/
guanine/ˈɡwɑːniːn/
guanosine/ˈɡwɑːnəsiːn/
GUI/ˈɡuːi/
haplotype/ˈhæplətaɪp/
HomoloGene/həˈmɒlədʒiːn/
Illumina/ɪˈljuːmɪnə/
in silico/ɪn ˈsɪlɪkoʊ/
intron/ˈɪntrɒn/
Kraken/ˈkrækən/
leucine/ˈljuːsiːn/
MEGAN/ˈmɛɡən/
MetaCyc/ˈmɛtəsaɪk/
metagenome/ˌmɛtəˈdʒiːnoʊm/
metagenomic/ˌmɛtədʒɪˈnoʊmɪk/
metagenomics/ˌmɛtədʒɪˈnoʊmɪks/
MG-RAST/ˈɛm ˈdʒiː ˈræst/
microarray/ˈmaɪkroʊəreɪ/
microbiome/ˌmaɪkroʊˈbaɪoʊm/
nucleotide/ˈnjuːkliətaɪd/
ontology/ɒnˈtɒlədʒi/
ortholog/ˈɔːrθəlɒɡ/
orthologous/ɔːrˈθɒləɡəs/
palindrome/ˈpælɪndroʊm/
peptide/ˈpɛptaɪd/
Pfam/ˈpiːfæm/
Phred/ˈfrɛd/
phylogenetic/ˌfaɪlədʒɪˈnɛtɪk/
phylogenetics/ˌfaɪlədʒɪˈnɛtɪks/
phylogeny/faɪˈlɒdʒɪni/
protein/ˈproʊtiːn/
proteome/ˈproʊtioʊm/
proteomic/ˌproʊtiˈoʊmɪk/
proteomics/ˌproʊtiˈoʊmɪks/
pseudogene/ˈsjuːdədʒiːn/
PubMed/ˈpʌbmɛd/
purine/ˈpjʊəriːn/
pyrimidine/pɪˈrɪmɪdiːn/
query/ˈkwɪəri/
sequence/ˈsiːkwəns/
sequencer/ˈsiːkwənsər/
Swiss-Prot/ˈswɪsprɒt/
thymidine/ˈθaɪmɪdiːn/
thymine/ˈθaɪmiːn/
Trimmomatic/ˌtrɪməˈmætɪk/
UniProt/ˈjuːnɪprɒt/

A

adenine /ˈædəniːn/
adenosine /əˈdɛnəsiːn/
alanine /ˈæləniːn/
amino acid /əˈmiːnoʊ ˈæsɪd/
angstrom /ˈæŋstrəm/
asparagine /əˈspærədʒiːn/
aspartic acid /əˈspɑːrtɪk ˈæsɪd/

B

Bayes /ˈbeɪz/
Bayesian /ˈbeɪziən/
Bioconductor /ˈbaɪoʊkəndʌktər/
bioinformatics /ˌbaɪoʊˌɪnfərˈmætɪks/
BLAST /ˈblæst/
Boolean /ˈbuːliən/
Broad Institute /ˈbroʊd ˈɪnstɪtjuːt/

C

ClustalW /ˈklʌstəl ˈdʌbəljuː/
computational /ˌkɒmpjʊˈteɪʃənəl/
contig /ˈkɒntɪɡ/
cytidine /ˈsɪtɪdiːn/
cytosine /ˈsaɪtəsiːn/

E

Entrez /ˈɒntreɪ/
epigenome /ˌɛpɪˈdʒiːnoʊm/
epigenomic /ˌɛpɪdʒɪˈnoʊmɪk/
epigenomics /ˌɛpɪdʒɪˈnoʊmɪks/
exon /ˈɛksɒn/

F

FASTA /ˈfæstə/
FASTQ /ˈfæst ˈkjuː/

G

GenBank /ˈdʒɛnbæŋk/
genome /ˈdʒiːnoʊm/
genomic /dʒɪˈnoʊmɪk/
genomics /dʒɪˈnoʊmɪks/
glutamate /ˈɡluːtəmeɪt/
glutamic acid /ɡluːˈtæmɪk ˈæsɪd/
glutamine /ˈɡluːtəmiːn/
glycine /ˈɡlaɪsiːn/
guanine /ˈɡwɑːniːn/
guanosine /ˈɡwɑːnəsiːn/
GUI /ˈɡuːi/

H

haplotype /ˈhæplətaɪp/
HomoloGene /həˈmɒlədʒiːn/

I

Illumina /ɪˈljuːmɪnə/
in silico /ɪn ˈsɪlɪkoʊ/
intron /ˈɪntrɒn/

K

Kraken /ˈkrækən/

L

leucine /ˈljuːsiːn/

M

MEGAN /ˈmɛɡən/
MetaCyc /ˈmɛtəsaɪk/
metagenome /ˌmɛtəˈdʒiːnoʊm/
metagenomic /ˌmɛtədʒɪˈnoʊmɪk/
metagenomics /ˌmɛtədʒɪˈnoʊmɪks/
MG-RAST /ˈɛm ˈdʒiː ˈræst/
microarray /ˈmaɪkroʊəreɪ/
microbiome /ˌmaɪkroʊˈbaɪoʊm/

N

nucleotide /ˈnjuːkliətaɪd/

O

ontology /ɒnˈtɒlədʒi/
ortholog /ˈɔːrθəlɒɡ/
orthologous /ɔːrˈθɒləɡəs/

P

palindrome /ˈpælɪndroʊm/
peptide /ˈpɛptaɪd/
Pfam /ˈpiːfæm/
Phred /ˈfrɛd/
phylogenetic /ˌfaɪlədʒɪˈnɛtɪk/
phylogenetics /ˌfaɪlədʒɪˈnɛtɪks/
phylogeny /faɪˈlɒdʒɪni/
protein /ˈproʊtiːn/
proteome /ˈproʊtioʊm/
proteomic /ˌproʊtiˈoʊmɪk/
proteomics /ˌproʊtiˈoʊmɪks/
pseudogene /ˈsjuːdədʒiːn/
PubMed /ˈpʌbmɛd/
purine /ˈpjʊəriːn/
pyrimidine /pɪˈrɪmɪdiːn/

Q

query /ˈkwɪəri/

S

sequence /ˈsiːkwəns/
sequencer /ˈsiːkwənsər/
Swiss-Prot /ˈswɪsprɒt/

T

thymidine /ˈθaɪmɪdiːn/
thymine /ˈθaɪmiːn/
Trimmomatic /ˌtrɪməˈmætɪk/

U

UniProt /ˈjuːnɪprɒt/

See also

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A collection of large-format sequence logos.

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Extract protein/nucleotide sequences from PDB files.

Explore the human genome.

A simple online editor for biological sequences in the FASTA format.

Create sequence logos from FASTA alignments.

A simple online editor for Protein Data Bank (PDB) files.

View the parse trees of Newick strings.

A curated list of awesome resources on bioinformatics.

A daily crossword puzzle for bioinformatics terms.

A simple tool for viewing the NCBI taxonomy tree.

Convert GenBank flat files to FASTA format.

Open FASTA files in the browser.

Convert FASTQ files to FASTA format.

Reconstruct phylogenetic trees from protein or DNA/RNA sequence alignments.

A simple online editor for biological sequences in the FASTQ format.

Convert AB1 files (Applied Biosystems/ABI trace files) to FASTA format.

An online visual editor for phylogenetic trees.

Visualize the parse tree of FASTA files.

A simple online editor for phylogenetic trees in the Newick format.

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