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Bioinformatics pronunciation guide

A pronunciation guide for bioinformatics terms.

TermPronunciation
adenine/ˈædəniːn/
adenosine/əˈdɛnəsiːn/
alanine/ˈæləniːn/
amino acid/əˈmiːnoʊ ˈæsɪd/
angstrom/ˈæŋstrəm/
asparagine/əˈspærədʒiːn/
aspartic acid/əˈspɑːrtɪk ˈæsɪd/
Bayes/ˈbeɪz/
Bayesian/ˈbeɪziən/
Bioconductor/ˈbaɪoʊkəndʌktər/
bioinformatics/ˌbaɪoʊˌɪnfərˈmætɪks/
BLAST/ˈblæst/
Boolean/ˈbuːliən/
Broad Institute/ˈbroʊd ˈɪnstɪtjuːt/
ClustalW/ˈklʌstəl ˈdʌbəljuː/
computational/ˌkɒmpjʊˈteɪʃənəl/
contig/ˈkɒntɪɡ/
cytidine/ˈsɪtɪdiːn/
cytosine/ˈsaɪtəsiːn/
Entrez/ˈɒntreɪ/
epigenome/ˌɛpɪˈdʒiːnoʊm/
epigenomic/ˌɛpɪdʒɪˈnoʊmɪk/
epigenomics/ˌɛpɪdʒɪˈnoʊmɪks/
exon/ˈɛksɒn/
FASTA/ˈfæstə/
FASTQ/ˈfæst ˈkjuː/
GenBank/ˈdʒɛnbæŋk/
genome/ˈdʒiːnoʊm/
genomic/dʒɪˈnoʊmɪk/
genomics/dʒɪˈnoʊmɪks/
glutamate/ˈɡluːtəmeɪt/
glutamic acid/ɡluːˈtæmɪk ˈæsɪd/
glutamine/ˈɡluːtəmiːn/
glycine/ˈɡlaɪsiːn/
guanine/ˈɡwɑːniːn/
guanosine/ˈɡwɑːnəsiːn/
GUI/ˈɡuːi/
haplotype/ˈhæplətaɪp/
HomoloGene/həˈmɒlədʒiːn/
Illumina/ɪˈljuːmɪnə/
in silico/ɪn ˈsɪlɪkoʊ/
intron/ˈɪntrɒn/
Kraken/ˈkrækən/
leucine/ˈljuːsiːn/
MEGAN/ˈmɛɡən/
MetaCyc/ˈmɛtəsaɪk/
metagenome/ˌmɛtəˈdʒiːnoʊm/
metagenomic/ˌmɛtədʒɪˈnoʊmɪk/
metagenomics/ˌmɛtədʒɪˈnoʊmɪks/
MG-RAST/ˈɛm ˈdʒiː ˈræst/
microarray/ˈmaɪkroʊəreɪ/
microbiome/ˌmaɪkroʊˈbaɪoʊm/
nucleotide/ˈnjuːkliətaɪd/
ontology/ɒnˈtɒlədʒi/
ortholog/ˈɔːrθəlɒɡ/
orthologous/ɔːrˈθɒləɡəs/
palindrome/ˈpælɪndroʊm/
peptide/ˈpɛptaɪd/
Pfam/ˈpiːfæm/
Phred/ˈfrɛd/
phylogenetic/ˌfaɪlədʒɪˈnɛtɪk/
phylogenetics/ˌfaɪlədʒɪˈnɛtɪks/
phylogeny/faɪˈlɒdʒɪni/
protein/ˈproʊtiːn/
proteome/ˈproʊtioʊm/
proteomic/ˌproʊtiˈoʊmɪk/
proteomics/ˌproʊtiˈoʊmɪks/
pseudogene/ˈsjuːdədʒiːn/
PubMed/ˈpʌbmɛd/
purine/ˈpjʊəriːn/
pyrimidine/pɪˈrɪmɪdiːn/
query/ˈkwɪəri/
sequence/ˈsiːkwəns/
sequencer/ˈsiːkwənsər/
Swiss-Prot/ˈswɪsprɒt/
thymidine/ˈθaɪmɪdiːn/
thymine/ˈθaɪmiːn/
Trimmomatic/ˌtrɪməˈmætɪk/
UniProt/ˈjuːnɪprɒt/

A

adenine /ˈædəniːn/
adenosine /əˈdɛnəsiːn/
alanine /ˈæləniːn/
amino acid /əˈmiːnoʊ ˈæsɪd/
angstrom /ˈæŋstrəm/
asparagine /əˈspærədʒiːn/
aspartic acid /əˈspɑːrtɪk ˈæsɪd/

B

Bayes /ˈbeɪz/
Bayesian /ˈbeɪziən/
Bioconductor /ˈbaɪoʊkəndʌktər/
bioinformatics /ˌbaɪoʊˌɪnfərˈmætɪks/
BLAST /ˈblæst/
Boolean /ˈbuːliən/
Broad Institute /ˈbroʊd ˈɪnstɪtjuːt/

C

ClustalW /ˈklʌstəl ˈdʌbəljuː/
computational /ˌkɒmpjʊˈteɪʃənəl/
contig /ˈkɒntɪɡ/
cytidine /ˈsɪtɪdiːn/
cytosine /ˈsaɪtəsiːn/

E

Entrez /ˈɒntreɪ/
epigenome /ˌɛpɪˈdʒiːnoʊm/
epigenomic /ˌɛpɪdʒɪˈnoʊmɪk/
epigenomics /ˌɛpɪdʒɪˈnoʊmɪks/
exon /ˈɛksɒn/

F

FASTA /ˈfæstə/
FASTQ /ˈfæst ˈkjuː/

G

GenBank /ˈdʒɛnbæŋk/
genome /ˈdʒiːnoʊm/
genomic /dʒɪˈnoʊmɪk/
genomics /dʒɪˈnoʊmɪks/
glutamate /ˈɡluːtəmeɪt/
glutamic acid /ɡluːˈtæmɪk ˈæsɪd/
glutamine /ˈɡluːtəmiːn/
glycine /ˈɡlaɪsiːn/
guanine /ˈɡwɑːniːn/
guanosine /ˈɡwɑːnəsiːn/
GUI /ˈɡuːi/

H

haplotype /ˈhæplətaɪp/
HomoloGene /həˈmɒlədʒiːn/

I

Illumina /ɪˈljuːmɪnə/
in silico /ɪn ˈsɪlɪkoʊ/
intron /ˈɪntrɒn/

K

Kraken /ˈkrækən/

L

leucine /ˈljuːsiːn/

M

MEGAN /ˈmɛɡən/
MetaCyc /ˈmɛtəsaɪk/
metagenome /ˌmɛtəˈdʒiːnoʊm/
metagenomic /ˌmɛtədʒɪˈnoʊmɪk/
metagenomics /ˌmɛtədʒɪˈnoʊmɪks/
MG-RAST /ˈɛm ˈdʒiː ˈræst/
microarray /ˈmaɪkroʊəreɪ/
microbiome /ˌmaɪkroʊˈbaɪoʊm/

N

nucleotide /ˈnjuːkliətaɪd/

O

ontology /ɒnˈtɒlədʒi/
ortholog /ˈɔːrθəlɒɡ/
orthologous /ɔːrˈθɒləɡəs/

P

palindrome /ˈpælɪndroʊm/
peptide /ˈpɛptaɪd/
Pfam /ˈpiːfæm/
Phred /ˈfrɛd/
phylogenetic /ˌfaɪlədʒɪˈnɛtɪk/
phylogenetics /ˌfaɪlədʒɪˈnɛtɪks/
phylogeny /faɪˈlɒdʒɪni/
protein /ˈproʊtiːn/
proteome /ˈproʊtioʊm/
proteomic /ˌproʊtiˈoʊmɪk/
proteomics /ˌproʊtiˈoʊmɪks/
pseudogene /ˈsjuːdədʒiːn/
PubMed /ˈpʌbmɛd/
purine /ˈpjʊəriːn/
pyrimidine /pɪˈrɪmɪdiːn/

Q

query /ˈkwɪəri/

S

sequence /ˈsiːkwəns/
sequencer /ˈsiːkwənsər/
Swiss-Prot /ˈswɪsprɒt/

T

thymidine /ˈθaɪmɪdiːn/
thymine /ˈθaɪmiːn/
Trimmomatic /ˌtrɪməˈmætɪk/

U

UniProt /ˈjuːnɪprɒt/

See also

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A collection of large-format sequence logos.

bioinformaticssequence logos

A simple online editor for Protein Data Bank (PDB) files.

Convert FASTQ files to FASTA format.

Visualize the parse tree of FASTA files.

A simple online editor for biological sequences in the FASTQ format.

Convert GenBank flat files to FASTA format.

Extract protein/nucleotide sequences from PDB files.

Explore the human genome.

Create sequence logos from FASTA alignments.

View the parse trees of Newick strings.

A simple online editor for phylogenetic trees in the Newick format.

Convert AB1 files (Applied Biosystems/ABI trace files) to FASTA format.

A simple tool for viewing the NCBI taxonomy tree.

A curated list of awesome resources on bioinformatics.

An online visual editor for phylogenetic trees.

A simple online editor for biological sequences in the FASTA format.

Open FASTA files in the browser.

A tool to generate plasmid maps from GenBank files.

Learn about the FASTA format and its applications.

Reconstruct phylogenetic trees from protein or DNA/RNA sequence alignments.

A daily crossword puzzle for bioinformatics terms.

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